Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 AC156031.1-201ENSMUST00000217288 2555 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 AC124421.1-201ENSMUST00000219114 4154 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 AC170999.1-201ENSMUST00000226359 1585 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm15901-201ENSMUST00000117663 941 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm11196-201ENSMUST00000119052 395 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm16589-201ENSMUST00000159522 918 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm37932-201ENSMUST00000192258 1167 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 CU024910.1-201ENSMUST00000214310 418 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm10145-201ENSMUST00000077776 462 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm8107-201ENSMUST00000117477 2009 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 AC115289.2-201ENSMUST00000223836 2803 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm9308-201ENSMUST00000119073 448 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm7733-201ENSMUST00000199038 919 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 AC154738.7-201ENSMUST00000228606 579 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 AC167013.5-201ENSMUST00000227597 2947 ntBASIC3.5□□□□□ -1.85
Herc1E9PZP8 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Herc1E9PZP8 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Herc1E9PZP8 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Herc1E9PZP8 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Herc1E9PZP8 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm22916-201ENSMUST00000157616 119 ntBASIC3.49□□□□□ -1.85
Herc1E9PZP8 Mir6367-201ENSMUST00000183385 102 ntBASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm37828-201ENSMUST00000192496 432 ntBASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Igkv4-83-201ENSMUST00000196933 334 ntBASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm29755-201ENSMUST00000196976 948 ntBASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC3.49□□□□□ -1.85
Herc1E9PZP8 CT954323.2-201ENSMUST00000222056 213 ntBASIC3.49□□□□□ -1.85
Herc1E9PZP8 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC3.49□□□□□ -1.85
Herc1E9PZP8 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm37255-201ENSMUST00000193302 3060 ntBASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm38056-201ENSMUST00000193928 5027 ntBASIC3.49□□□□□ -1.85
Herc1E9PZP8 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Herc1E9PZP8 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm38339-201ENSMUST00000195479 1829 ntBASIC3.49□□□□□ -1.85
Herc1E9PZP8 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Herc1E9PZP8 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms