Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Mid1-205ENSMUST00000112105 3974 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Stam-201ENSMUST00000028050 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Gm43820-201ENSMUST00000199414 3346 ntBASIC1.59□□□□□ -2.16
Gm4559A4IF42 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 AC123619.2-202ENSMUST00000225097 1568 ntBASIC1.59□□□□□ -2.16
Gm4559A4IF42 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Gm6903-201ENSMUST00000160509 1366 ntBASIC1.59□□□□□ -2.16
Gm4559A4IF42 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Gm45606-201ENSMUST00000209836 2795 ntBASIC1.59□□□□□ -2.16
Gm4559A4IF42 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Gm4559A4IF42 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm6992-201ENSMUST00000217973 1607 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Smok3b-201ENSMUST00000100537 2333 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm37589-201ENSMUST00000193609 3994 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Cdk16-202ENSMUST00000115364 3270 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm20682-201ENSMUST00000176552 3517 ntTSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 CT025686.2-201ENSMUST00000227898 3315 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 AC154755.2-201ENSMUST00000224384 2857 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Acsl6-206ENSMUST00000101211 3106 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm43891-201ENSMUST00000205132 3112 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm44095-201ENSMUST00000204631 1931 ntBASIC1.58□□□□□ -2.16
Gm4559A4IF42 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC1.58□□□□□ -2.16
Gm4559A4IF42 Styk1-201ENSMUST00000049150 3380 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms