Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm26340-201ENSMUST00000102365 99 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm23768-201ENSMUST00000104440 131 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm23884-201ENSMUST00000122687 294 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm37103-201ENSMUST00000191830 115 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm45196-201ENSMUST00000206751 825 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Glycam1-204ENSMUST00000228895 641 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Mir7b-201ENSMUST00000083557 111 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm29486-201ENSMUST00000088648 372 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 AU020206-202ENSMUST00000206358 3009 ntBASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm14116-201ENSMUST00000117733 805 ntBASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm11987-201ENSMUST00000118524 381 ntBASIC6.49□□□□□ -1.37
Cldn3Q9Z0G9 Gm16511-201ENSMUST00000120019 564 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms