Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm22794-201ENSMUST00000157228 306 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm24422-201ENSMUST00000157800 119 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Mir1981-201ENSMUST00000157934 82 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm27026-201ENSMUST00000183003 892 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm27401-201ENSMUST00000184052 173 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm28779-201ENSMUST00000189678 323 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm29214-201ENSMUST00000190216 570 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Trbv24-201ENSMUST00000194614 347 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm8921-201ENSMUST00000204306 649 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm44665-201ENSMUST00000205381 251 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 AC156504.1-201ENSMUST00000214608 157 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 AC079644.1-201ENSMUST00000220586 405 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l9-201ENSMUST00000101891 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm26504-201ENSMUST00000102033 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm5752-201ENSMUST00000117771 594 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm13579-201ENSMUST00000118519 517 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm13482-201ENSMUST00000119842 254 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm5135-201ENSMUST00000121100 573 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm14787-201ENSMUST00000121236 388 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm12313-201ENSMUST00000121347 421 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm12754-201ENSMUST00000121908 454 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22025-201ENSMUST00000122734 302 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm6428-201ENSMUST00000161062 345 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Mir3078-201ENSMUST00000175231 87 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22258-201ENSMUST00000177645 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm26502-201ENSMUST00000177732 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l13-201ENSMUST00000177737 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm25350-201ENSMUST00000177849 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l15-201ENSMUST00000177940 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm23446-201ENSMUST00000177977 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l4-201ENSMUST00000177982 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm26201-201ENSMUST00000178047 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm24711-201ENSMUST00000178062 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm24609-201ENSMUST00000178166 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm23265-201ENSMUST00000178321 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22812-201ENSMUST00000178329 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l3-201ENSMUST00000178370 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm26246-201ENSMUST00000178388 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22131-201ENSMUST00000178415 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm25155-201ENSMUST00000178450 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm24760-201ENSMUST00000178530 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm26032-201ENSMUST00000178535 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22285-201ENSMUST00000178576 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22776-201ENSMUST00000178634 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm22417-201ENSMUST00000178656 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l2-201ENSMUST00000178675 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm26270-201ENSMUST00000178690 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l16-201ENSMUST00000178777 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm25074-201ENSMUST00000178782 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm25210-201ENSMUST00000178813 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm25157-201ENSMUST00000178914 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Gm23313-201ENSMUST00000178931 94 ntBASIC8.87□□□□□ -0.99
Ube3bQ9ES34 Snord116l17-201ENSMUST00000178936 94 ntBASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms