Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm22374-201ENSMUST00000104583 132 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm11271-201ENSMUST00000116054 440 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm23903-201ENSMUST00000157566 131 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm27601-201ENSMUST00000184794 127 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm29197-201ENSMUST00000185922 702 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm412-201ENSMUST00000193360 948 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm8190-201ENSMUST00000199603 586 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm17918-201ENSMUST00000205315 574 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm6990-201ENSMUST00000086830 348 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdc40Q9DC48 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm14870-201ENSMUST00000118414 156 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm37177-201ENSMUST00000193768 417 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm17997-201ENSMUST00000211801 840 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm22684-201ENSMUST00000082849 132 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.05□□□□□ -1.44
Cdc40Q9DC48 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdc40Q9DC48 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms