Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm9314-201ENSMUST00000199881 1528 ntBASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Smc1aQ9CU62 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Gm22953-201ENSMUST00000116724 101 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Gm13357-201ENSMUST00000120528 537 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Gm37177-201ENSMUST00000193768 417 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Gm6077-201ENSMUST00000196008 499 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 AC157085.1-201ENSMUST00000216343 162 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Gm18591-201ENSMUST00000220568 763 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.3□□□□□ -1.24
Smc1aQ9CU62 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm23031-201ENSMUST00000157998 119 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm25435-201ENSMUST00000158277 267 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm26570-201ENSMUST00000180672 342 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Mir6911-201ENSMUST00000184241 69 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm28846-201ENSMUST00000189161 368 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm6074-201ENSMUST00000193340 451 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm44538-201ENSMUST00000205615 348 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm25587-201ENSMUST00000082498 166 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm22351-201ENSMUST00000083925 107 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm19210-201ENSMUST00000199562 1350 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm44843-201ENSMUST00000208320 1396 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm20300-201ENSMUST00000214634 3440 ntBASIC7.29□□□□□ -1.24
Smc1aQ9CU62 Gm16523-202ENSMUST00000203640 4750 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Gm44584-201ENSMUST00000208395 2880 ntBASIC7.28□□□□□ -1.24
Smc1aQ9CU62 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms