Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm9064-201ENSMUST00000163579 566 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm20432-201ENSMUST00000173716 250 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm22254-201ENSMUST00000179186 110 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm27866-201ENSMUST00000184459 171 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm43382-201ENSMUST00000198954 838 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm44690-201ENSMUST00000207984 382 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 AC110816.1-201ENSMUST00000218559 980 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm5436-201ENSMUST00000058103 643 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm21731-201ENSMUST00000079524 489 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.31□□□□□ -1.4
Cstf3Q99LI7 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm11501-201ENSMUST00000118039 581 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm13877-201ENSMUST00000120614 417 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm6067-201ENSMUST00000121648 491 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm6542-201ENSMUST00000153606 772 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm24465-201ENSMUST00000178398 107 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm28846-201ENSMUST00000189161 368 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm7867-201ENSMUST00000189856 546 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm8454-201ENSMUST00000196980 811 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm9652-201ENSMUST00000209345 163 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 AC121804.1-201ENSMUST00000221016 394 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf3Q99LI7 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms