Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm18628-201ENSMUST00000220584 475 ntBASIC6.21□□□□□ -1.42
Lsm1Q8VC85 AC211878.1-201ENSMUST00000221668 474 ntBASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Gm9293-201ENSMUST00000223096 306 ntBASIC6.21□□□□□ -1.42
Lsm1Q8VC85 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.21□□□□□ -1.42
Lsm1Q8VC85 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lsm1Q8VC85 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm6884-201ENSMUST00000119318 615 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm14614-201ENSMUST00000119873 384 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm7418-201ENSMUST00000162120 801 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm37103-201ENSMUST00000191830 115 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm43546-201ENSMUST00000196721 943 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm42713-201ENSMUST00000202709 945 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm45136-201ENSMUST00000205793 943 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm6575-201ENSMUST00000222946 697 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lsm1Q8VC85 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm12677-201ENSMUST00000118668 426 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm3810-201ENSMUST00000122413 476 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm20549-201ENSMUST00000174804 429 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm24157-201ENSMUST00000175265 111 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Mir8105-201ENSMUST00000184718 89 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm37376-201ENSMUST00000192176 453 ntBASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.19□□□□□ -1.42
Lsm1Q8VC85 Gm43867-201ENSMUST00000203860 525 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms