Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm4332-201ENSMUST00000196114 346 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm44237-201ENSMUST00000205183 936 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm19033-201ENSMUST00000208516 964 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm44548-201ENSMUST00000208929 192 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm45739-201ENSMUST00000213094 388 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm18409-202ENSMUST00000220105 529 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm24454-201ENSMUST00000083349 132 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm42490-201ENSMUST00000198595 2064 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.43□□□□□ -1.22
Syne4Q8CII8 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.43□□□□□ -1.22
Syne4Q8CII8 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm11848-201ENSMUST00000121207 973 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm8317-201ENSMUST00000121261 471 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm16164-201ENSMUST00000160078 468 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm23632-201ENSMUST00000175289 125 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm24369-201ENSMUST00000175387 96 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm5947-201ENSMUST00000179156 714 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm5645-201ENSMUST00000179597 714 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Mir6952-201ENSMUST00000185092 61 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm20926-201ENSMUST00000194457 696 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Mir6906-201ENSMUST00000198998 58 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm17997-201ENSMUST00000211801 840 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Snora44-201ENSMUST00000082670 129 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.42□□□□□ -1.22
Syne4Q8CII8 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Syne4Q8CII8 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.42□□□□□ -1.22
Syne4Q8CII8 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm13428-201ENSMUST00000117540 365 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm14529-201ENSMUST00000117894 406 ntBASIC7.41□□□□□ -1.22
Syne4Q8CII8 Gm15048-201ENSMUST00000118201 954 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms