Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm43211-201ENSMUST00000196901 1899 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm44412-201ENSMUST00000203018 294 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm30646-201ENSMUST00000207662 180 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm45259-201ENSMUST00000209217 1006 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm4556-201ENSMUST00000217808 355 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Gm42968-201ENSMUST00000198578 1372 ntBASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.82□□□□□ -1.16
Brf1Q8CFK2 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm37255-201ENSMUST00000193302 3060 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm23768-201ENSMUST00000104440 131 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm11920-201ENSMUST00000118491 563 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm12375-201ENSMUST00000119331 921 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm8312-201ENSMUST00000119380 618 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm14531-201ENSMUST00000120845 285 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm8648-201ENSMUST00000122457 221 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm20637-201ENSMUST00000175715 462 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm25244-201ENSMUST00000178089 132 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm27601-201ENSMUST00000184794 127 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Mir8097-201ENSMUST00000185150 119 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm43849-201ENSMUST00000201086 215 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm45078-201ENSMUST00000205343 546 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 AC069561.1-201ENSMUST00000213750 424 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 AC125539.1-202ENSMUST00000226449 670 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Brf1Q8CFK2 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm12937-201ENSMUST00000118333 448 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm11445-201ENSMUST00000119101 532 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm5392-201ENSMUST00000122189 789 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Gm12504-202ENSMUST00000148026 306 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC7.8□□□□□ -1.16
Brf1Q8CFK2 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms