Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm13983-201ENSMUST00000118018 865 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm13265-201ENSMUST00000118090 421 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm5793-201ENSMUST00000119393 630 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm23430-201ENSMUST00000122490 314 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm24735-201ENSMUST00000158859 118 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm28023-201ENSMUST00000184556 60 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm27825-201ENSMUST00000184586 60 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm7463-201ENSMUST00000201541 547 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm4556-201ENSMUST00000217808 355 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm38263-201ENSMUST00000195879 3059 ntBASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Nup88Q8CEC0 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm14870-201ENSMUST00000118414 156 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm11920-201ENSMUST00000118491 563 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm10177-201ENSMUST00000160052 444 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm5456-201ENSMUST00000170706 844 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm17045-201ENSMUST00000178600 844 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm43436-201ENSMUST00000199308 147 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm44538-201ENSMUST00000205615 348 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm17849-201ENSMUST00000219788 853 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.61□□□□□ -1.19
Nup88Q8CEC0 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Nup88Q8CEC0 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm23748-201ENSMUST00000104227 131 ntBASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm11462-201ENSMUST00000117749 562 ntBASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm5387-201ENSMUST00000119776 857 ntBASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm15181-201ENSMUST00000120142 177 ntBASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm12229-201ENSMUST00000120487 468 ntBASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm8215-201ENSMUST00000120627 990 ntBASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm16016-201ENSMUST00000120831 550 ntBASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm14212-201ENSMUST00000122023 826 ntBASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC7.6□□□□□ -1.19
Nup88Q8CEC0 Gm25904-201ENSMUST00000158491 143 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms