Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clcn1Q64347 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Clcn1Q64347 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Clcn1Q64347 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clcn1Q64347 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clcn1Q64347 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Clcn1Q64347 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Clcn1Q64347 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Clcn1Q64347 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clcn1Q64347 Gm44996-201ENSMUST00000208787 2980 ntBASIC9.56□□□□□ -0.88
Clcn1Q64347 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Clcn1Q64347 Gm16072-201ENSMUST00000119574 2377 ntBASIC9.56□□□□□ -0.88
Clcn1Q64347 Gm19074-201ENSMUST00000218915 1429 ntBASIC9.56□□□□□ -0.88
Clcn1Q64347 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm19176-201ENSMUST00000222149 1831 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm6743-201ENSMUST00000117345 1066 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm13444-201ENSMUST00000119445 522 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm13574-201ENSMUST00000120482 394 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm26024-201ENSMUST00000158657 322 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm28997-201ENSMUST00000188759 429 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm36961-201ENSMUST00000191980 132 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm4856-201ENSMUST00000192696 1091 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm43476-201ENSMUST00000197873 405 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm8189-203ENSMUST00000211159 1225 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 AC163296.1-202ENSMUST00000218395 661 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC9.55□□□□□ -0.88
Clcn1Q64347 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 AC069562.1-201ENSMUST00000224206 434 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 AC110176.1-201ENSMUST00000226219 504 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 CT030662.2-201ENSMUST00000226942 805 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 CT025548.1-201ENSMUST00000227459 257 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Mir465-201ENSMUST00000093563 74 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm18493-201ENSMUST00000192084 1612 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm42700-201ENSMUST00000199071 2437 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Clcn1Q64347 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Gm38380-201ENSMUST00000195718 2248 ntBASIC9.55□□□□□ -0.88
Clcn1Q64347 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Clcn1Q64347 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm43498-201ENSMUST00000202002 1486 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 AC165260.6-202ENSMUST00000224959 1958 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
Clcn1Q64347 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Defa-ps7-201ENSMUST00000117139 168 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm14879-201ENSMUST00000117308 507 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm13130-201ENSMUST00000119195 1166 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm6142-201ENSMUST00000120290 325 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm23867-201ENSMUST00000122649 274 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm16102-201ENSMUST00000160955 420 ntBASIC9.54□□□□□ -0.88
Clcn1Q64347 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms