Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm24901-201ENSMUST00000158125 110 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm3091-201ENSMUST00000163408 484 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm3208-201ENSMUST00000168281 427 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 4931429L15Rik-203ENSMUST00000172280 1140 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm20686-201ENSMUST00000175846 535 ntTSL 2 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm25145-201ENSMUST00000177640 110 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 n-R5s101-201ENSMUST00000177910 119 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 n-R5s114-201ENSMUST00000178297 119 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 n-R5s119-201ENSMUST00000178861 119 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 n-R5s127-201ENSMUST00000179185 119 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 n-R5s129-201ENSMUST00000180122 119 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 n-R5s131-201ENSMUST00000180280 119 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm18667-201ENSMUST00000186523 484 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm18969-201ENSMUST00000189423 730 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm37539-201ENSMUST00000192644 235 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm9057-201ENSMUST00000198791 296 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm43026-201ENSMUST00000202972 325 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm6989-201ENSMUST00000218409 654 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 AC132954.1-201ENSMUST00000221017 342 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC6.2□□□□□ -1.42
Foxc1Q61572 AC134917.3-201ENSMUST00000222057 1283 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 AC138667.2-201ENSMUST00000224880 598 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Foxc1Q61572 5330417H12Rik-201ENSMUST00000060348 1191 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm4825-201ENSMUST00000079690 408 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Foxc1Q61572 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Foxc1Q61572 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC6.2□□□□□ -1.42
Foxc1Q61572 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Foxc1Q61572 Olfr954-202ENSMUST00000214818 3299 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm4858-203ENSMUST00000195847 1451 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Foxc1Q61572 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Idh3g-201ENSMUST00000052761 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Foxc1Q61572 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm44986-201ENSMUST00000206292 2829 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm7389-201ENSMUST00000181162 2884 ntBASIC6.2□□□□□ -1.42
Foxc1Q61572 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Foxc1Q61572 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Foxc1Q61572 Gm44154-201ENSMUST00000204559 2724 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Tubd1-202ENSMUST00000069503 1871 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm42549-201ENSMUST00000202392 7004 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm43099-201ENSMUST00000198943 5241 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm43465-201ENSMUST00000200367 2802 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Pde10a-203ENSMUST00000115708 2471 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm43609-201ENSMUST00000199084 2712 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm24938-201ENSMUST00000102225 110 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm24542-201ENSMUST00000103870 110 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm25803-201ENSMUST00000104419 131 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Foxc1Q61572 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Foxc1Q61572 Mir467f-201ENSMUST00000116923 120 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm11352-201ENSMUST00000119264 517 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm13198-201ENSMUST00000119322 826 ntBASIC6.19□□□□□ -1.42
Foxc1Q61572 Gm5388-201ENSMUST00000120059 1117 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms