Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Gm9788-201ENSMUST00000057038 906 ntBASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Upf3bQ3ULL6 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm12937-201ENSMUST00000118333 448 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm16511-201ENSMUST00000120019 564 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm25487-201ENSMUST00000158725 125 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm11107-201ENSMUST00000165414 505 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm42708-201ENSMUST00000196332 905 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm45196-201ENSMUST00000206751 825 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm2225-201ENSMUST00000209570 377 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm19340-201ENSMUST00000221995 345 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm24695-201ENSMUST00000083877 83 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.87□□□□□ -1.31
Upf3bQ3ULL6 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 AU020206-202ENSMUST00000206358 3009 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm22284-201ENSMUST00000104132 132 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm15502-201ENSMUST00000121449 208 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms