Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm11821-201ENSMUST00000117335 979 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm13930-201ENSMUST00000118569 368 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm12262-201ENSMUST00000119915 305 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm6446-201ENSMUST00000120604 818 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Mir1907-201ENSMUST00000122509 90 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm23884-201ENSMUST00000122687 294 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm26346-201ENSMUST00000157525 329 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm23071-201ENSMUST00000158242 115 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm27210-201ENSMUST00000184263 402 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm28527-201ENSMUST00000185210 297 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm18700-201ENSMUST00000185791 553 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm5853-201ENSMUST00000197183 632 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm7166-201ENSMUST00000199715 303 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm30708-201ENSMUST00000202183 312 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm44265-201ENSMUST00000203631 465 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm44809-201ENSMUST00000208305 993 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm18103-201ENSMUST00000216621 779 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm3266-201ENSMUST00000217832 591 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm5080-201ENSMUST00000220341 743 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm6436-201ENSMUST00000077163 451 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm36930-201ENSMUST00000195431 2376 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 AC131667.1-201ENSMUST00000214665 2175 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Gm15950-201ENSMUST00000162902 1973 ntBASIC5.66□□□□□ -1.5
Nkx3-1P97436 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Nkx3-1P97436 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.65□□□□□ -1.5
Nkx3-1P97436 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Nkx3-1P97436 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms