Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tpm1P58771 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Tpm1P58771 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tpm1P58771 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tpm1P58771 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Tpm1P58771 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Tpm1P58771 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Tpm1P58771 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Tpm1P58771 Gm45548-201ENSMUST00000210076 3167 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Tpm1P58771 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm24173-201ENSMUST00000104130 128 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm11462-201ENSMUST00000117749 562 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm13983-201ENSMUST00000118018 865 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm15311-201ENSMUST00000119682 282 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm15305-201ENSMUST00000120354 288 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm23071-201ENSMUST00000158242 115 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm24359-201ENSMUST00000158418 221 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Tpm1P58771 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm22702-201ENSMUST00000175372 69 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.06□□□□□ -1.28
Tpm1P58771 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.06□□□□□ -1.28
Tpm1P58771 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.06□□□□□ -1.28
Tpm1P58771 Gm28620-201ENSMUST00000190463 439 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Tpm1P58771 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.06□□□□□ -1.28
Tpm1P58771 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 AC161877.2-201ENSMUST00000226248 545 ntBASIC7.06□□□□□ -1.28
Tpm1P58771 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Tpm1P58771 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Tpm1P58771 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Tpm1P58771 Gm43190-201ENSMUST00000187850 1779 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Tpm1P58771 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC7.05□□□□□ -1.28
Tpm1P58771 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Gm24888-201ENSMUST00000104387 130 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Tpm1P58771 Gm11617-201ENSMUST00000119609 639 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Gm14465-201ENSMUST00000120603 567 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.05□□□□□ -1.28
Tpm1P58771 Gm7393-201ENSMUST00000172650 739 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Mir6348-201ENSMUST00000183804 120 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.05□□□□□ -1.28
Tpm1P58771 Gm17822-201ENSMUST00000204307 351 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Gm45156-201ENSMUST00000207255 439 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.05□□□□□ -1.28
Tpm1P58771 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.05□□□□□ -1.28
Tpm1P58771 AC153936.1-201ENSMUST00000219874 395 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 AC147245.1-201ENSMUST00000223294 677 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Tpm1P58771 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Tpm1P58771 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Gm42781-201ENSMUST00000201317 2719 ntBASIC7.05□□□□□ -1.28
Tpm1P58771 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Tpm1P58771 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Tpm1P58771 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Tpm1P58771 Gm28320-201ENSMUST00000187777 2273 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 Gm45793-201ENSMUST00000207900 1342 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.04□□□□□ -1.28
Tpm1P58771 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Tpm1P58771 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Tpm1P58771 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms