Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Sox1P53783 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm28211-201ENSMUST00000190920 315 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm28639-201ENSMUST00000191519 481 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm38237-201ENSMUST00000193366 376 ntBASIC7.47□□□□□ -1.21
Sox1P53783 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm45026-201ENSMUST00000205292 833 ntBASIC7.47□□□□□ -1.21
Sox1P53783 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Gm18409-202ENSMUST00000220105 529 ntBASIC7.47□□□□□ -1.21
Sox1P53783 AC154450.1-201ENSMUST00000220911 485 ntBASIC7.47□□□□□ -1.21
Sox1P53783 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC7.47□□□□□ -1.21
Sox1P53783 CT025603.4-201ENSMUST00000225777 413 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Anxa13-202ENSMUST00000227274 1201 ntBASIC7.47□□□□□ -1.21
Sox1P53783 AC146601.1-201ENSMUST00000227910 905 ntBASIC7.47□□□□□ -1.21
Sox1P53783 AC158981.3-202ENSMUST00000228906 523 ntBASIC7.47□□□□□ -1.21
Sox1P53783 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
Sox1P53783 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Sox1P53783 Olfr117-203ENSMUST00000215414 3498 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Sox1P53783 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC7.47□□□□□ -1.21
Sox1P53783 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Sox1P53783 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Sox1P53783 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Sox1P53783 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Sox1P53783 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Sox1P53783 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Sox1P53783 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Sox1P53783 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Sox1P53783 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Sox1P53783 Gm45084-201ENSMUST00000207096 1957 ntBASIC7.46□□□□□ -1.21
Sox1P53783 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Sox1P53783 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Sox1P53783 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Sox1P53783 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Sox1P53783 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Sox1P53783 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
Sox1P53783 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
Sox1P53783 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.46□□□□□ -1.22
Sox1P53783 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm13806-201ENSMUST00000117822 325 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm16056-201ENSMUST00000119293 135 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm11420-201ENSMUST00000120047 402 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm13578-201ENSMUST00000120849 590 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm14979-201ENSMUST00000121561 1035 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm11879-201ENSMUST00000121885 702 ntBASIC7.46□□□□□ -1.22
Sox1P53783 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
Sox1P53783 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.46□□□□□ -1.22
Sox1P53783 Gm22793-201ENSMUST00000157227 330 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.46□□□□□ -1.22
Sox1P53783 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Sox1P53783 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Gm27460-201ENSMUST00000184213 100 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Mir7028-201ENSMUST00000185016 64 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28739-201ENSMUST00000185415 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28219-201ENSMUST00000185452 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28542-201ENSMUST00000185545 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28303-201ENSMUST00000185642 747 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29244-201ENSMUST00000185825 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29437-201ENSMUST00000185865 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29412-201ENSMUST00000185869 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28910-201ENSMUST00000185921 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28812-201ENSMUST00000185963 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29468-201ENSMUST00000185978 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28854-201ENSMUST00000186218 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28636-201ENSMUST00000186353 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28452-201ENSMUST00000186623 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28859-201ENSMUST00000186650 616 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29298-201ENSMUST00000186704 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28185-201ENSMUST00000186815 694 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28227-201ENSMUST00000186862 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28796-201ENSMUST00000186905 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29659-201ENSMUST00000187063 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28473-201ENSMUST00000187325 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28682-201ENSMUST00000187430 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28738-201ENSMUST00000187480 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28949-201ENSMUST00000187805 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28773-201ENSMUST00000187925 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29319-201ENSMUST00000188060 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29422-201ENSMUST00000188062 694 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm21617-201ENSMUST00000188297 691 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28787-201ENSMUST00000188357 696 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms