Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm29141-201ENSMUST00000190357 882 ntBASIC5.83□□□□□ -1.48
Rfx3P48381 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.83□□□□□ -1.48
Rfx3P48381 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.83□□□□□ -1.48
Rfx3P48381 Gm43390-201ENSMUST00000196614 421 ntBASIC5.83□□□□□ -1.48
Rfx3P48381 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.83□□□□□ -1.48
Rfx3P48381 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC5.83□□□□□ -1.48
Rfx3P48381 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC5.83□□□□□ -1.48
Rfx3P48381 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.83□□□□□ -1.48
Rfx3P48381 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.83□□□□□ -1.48
Rfx3P48381 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Gm23054-201ENSMUST00000082804 162 ntBASIC5.83□□□□□ -1.48
Rfx3P48381 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Rfx3P48381 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.83□□□□□ -1.48
Rfx3P48381 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Rfx3P48381 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Rfx3P48381 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Rfx3P48381 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.83□□□□□ -1.48
Rfx3P48381 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Rfx3P48381 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Rfx3P48381 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.83□□□□□ -1.48
Rfx3P48381 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rfx3P48381 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rfx3P48381 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rfx3P48381 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm9144-201ENSMUST00000101625 1008 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Rfx3P48381 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Snord88a-201ENSMUST00000116723 90 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm7821-201ENSMUST00000117111 788 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm13141-201ENSMUST00000117417 456 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm11501-201ENSMUST00000118039 581 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm11976-201ENSMUST00000119236 295 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm6142-201ENSMUST00000120290 325 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.82□□□□□ -1.48
Rfx3P48381 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm24157-201ENSMUST00000175265 111 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm9274-201ENSMUST00000182505 984 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm27158-201ENSMUST00000183813 238 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Mir7033-201ENSMUST00000184259 81 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm5050-201ENSMUST00000197164 775 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm42752-201ENSMUST00000198394 1106 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm44411-201ENSMUST00000204172 349 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Rfx3P48381 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm45693-201ENSMUST00000211391 1157 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Gm4042-201ENSMUST00000216946 637 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 AC155270.1-202ENSMUST00000221503 352 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.82□□□□□ -1.48
Rfx3P48381 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Rfx3P48381 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Rfx3P48381 Mir106b-201ENSMUST00000083580 82 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.82□□□□□ -1.48
Rfx3P48381 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Rfx3P48381 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rfx3P48381 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Rfx3P48381 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rfx3P48381 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.81□□□□□ -1.48
Rfx3P48381 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rfx3P48381 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Rfx3P48381 Gm22256-201ENSMUST00000102291 107 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Gm12468-201ENSMUST00000116189 404 ntBASIC5.81□□□□□ -1.48
Rfx3P48381 Gm13983-201ENSMUST00000118018 865 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms