Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.12□□□□□ -1.43
Tnfsf4P43488 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm12174-201ENSMUST00000119853 813 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm13357-201ENSMUST00000120528 537 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm7418-201ENSMUST00000162120 801 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm28023-201ENSMUST00000184556 60 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm27825-201ENSMUST00000184586 60 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm37477-201ENSMUST00000195215 884 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm9367-201ENSMUST00000205703 546 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm20136-201ENSMUST00000207501 891 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm45394-201ENSMUST00000209240 1175 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm9652-201ENSMUST00000209345 163 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm6436-201ENSMUST00000077163 451 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.11□□□□□ -1.43
Tnfsf4P43488 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Tnfsf4P43488 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.11□□□□□ -1.43
Tnfsf4P43488 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.1□□□□□ -1.43
Tnfsf4P43488 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Tnfsf4P43488 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Rnu11-201ENSMUST00000104135 134 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm24989-201ENSMUST00000104461 88 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm26146-201ENSMUST00000104478 185 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm12778-201ENSMUST00000122341 333 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm23954-201ENSMUST00000157213 353 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm4585-201ENSMUST00000207218 452 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm7557-201ENSMUST00000221935 865 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Gm2754-201ENSMUST00000223383 589 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.1□□□□□ -1.43
Tnfsf4P43488 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms