Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox6P40645 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Sox6P40645 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Sox6P40645 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.06□□□□□ -1.44
Sox6P40645 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.06□□□□□ -1.44
Sox6P40645 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.06□□□□□ -1.44
Sox6P40645 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.06□□□□□ -1.44
Sox6P40645 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.06□□□□□ -1.44
Sox6P40645 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.06□□□□□ -1.44
Sox6P40645 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm5341-201ENSMUST00000058881 489 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Sox6P40645 Gm23054-201ENSMUST00000082804 162 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Mir106b-201ENSMUST00000083580 82 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox6P40645 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox6P40645 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox6P40645 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox6P40645 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.06□□□□□ -1.44
Sox6P40645 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Naip3-201ENSMUST00000118082 4208 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox6P40645 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox6P40645 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.06□□□□□ -1.44
Sox6P40645 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sox6P40645 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Sox6P40645 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.05□□□□□ -1.44
Sox6P40645 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox6P40645 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox6P40645 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox6P40645 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.05□□□□□ -1.44
Sox6P40645 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Sox6P40645 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox6P40645 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox6P40645 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox6P40645 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox6P40645 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox6P40645 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Gm25556-201ENSMUST00000158077 144 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox6P40645 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Gm43390-201ENSMUST00000196614 421 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Gm43089-201ENSMUST00000199162 275 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Gm43906-201ENSMUST00000203194 906 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Gm45279-201ENSMUST00000210315 391 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Gm45246-201ENSMUST00000210820 367 ntBASIC6.05□□□□□ -1.44
Sox6P40645 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox6P40645 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox6P40645 Gm17849-201ENSMUST00000219788 853 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox6P40645 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.05□□□□□ -1.44
Sox6P40645 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.05□□□□□ -1.44
Sox6P40645 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox6P40645 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox6P40645 Gm24621-201ENSMUST00000082679 140 ntBASIC6.05□□□□□ -1.44
Sox6P40645 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Sox6P40645 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sox6P40645 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.05□□□□□ -1.44
Sox6P40645 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.05□□□□□ -1.44
Sox6P40645 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sox6P40645 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox6P40645 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox6P40645 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.04□□□□□ -1.44
Sox6P40645 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.04□□□□□ -1.44
Sox6P40645 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox6P40645 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Sox6P40645 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Sox6P40645 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms