Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Gm44361-201ENSMUST00000197960 94 ntBASIC7.62□□□□□ -1.19
Traf1P39428 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.62□□□□□ -1.19
Traf1P39428 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.62□□□□□ -1.19
Traf1P39428 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.62□□□□□ -1.19
Traf1P39428 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC7.62□□□□□ -1.19
Traf1P39428 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Gm22351-201ENSMUST00000083925 107 ntBASIC7.62□□□□□ -1.19
Traf1P39428 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC7.62□□□□□ -1.19
Traf1P39428 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
Traf1P39428 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.62□□□□□ -1.19
Traf1P39428 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Traf1P39428 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
Traf1P39428 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.62□□□□□ -1.19
Traf1P39428 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Traf1P39428 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
Traf1P39428 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
Traf1P39428 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC7.62□□□□□ -1.19
Traf1P39428 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC7.62□□□□□ -1.19
Traf1P39428 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
Traf1P39428 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.61□□□□□ -1.19
Traf1P39428 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Traf1P39428 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Traf1P39428 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Traf1P39428 Gm14038-201ENSMUST00000121500 807 ntBASIC7.61□□□□□ -1.19
Traf1P39428 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.61□□□□□ -1.19
Traf1P39428 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.61□□□□□ -1.19
Traf1P39428 Gm25374-201ENSMUST00000158158 101 ntBASIC7.61□□□□□ -1.19
Traf1P39428 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.61□□□□□ -1.19
Traf1P39428 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Traf1P39428 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Traf1P39428 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.61□□□□□ -1.19
Traf1P39428 Gm17918-201ENSMUST00000205315 574 ntBASIC7.61□□□□□ -1.19
Traf1P39428 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.61□□□□□ -1.19
Traf1P39428 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.61□□□□□ -1.19
Traf1P39428 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.61□□□□□ -1.19
Traf1P39428 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Gm24032-201ENSMUST00000083932 159 ntBASIC7.61□□□□□ -1.19
Traf1P39428 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.61□□□□□ -1.19
Traf1P39428 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Traf1P39428 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Traf1P39428 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Traf1P39428 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.6□□□□□ -1.19
Traf1P39428 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Gm24272-201ENSMUST00000102329 98 ntBASIC7.6□□□□□ -1.19
Traf1P39428 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Traf1P39428 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Traf1P39428 Gm8250-201ENSMUST00000117398 774 ntBASIC7.6□□□□□ -1.19
Traf1P39428 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Gm15765-201ENSMUST00000118407 910 ntBASIC7.6□□□□□ -1.19
Traf1P39428 Gm9506-201ENSMUST00000118516 320 ntBASIC7.6□□□□□ -1.19
Traf1P39428 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.6□□□□□ -1.19
Traf1P39428 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Gm9064-201ENSMUST00000163579 566 ntBASIC7.6□□□□□ -1.19
Traf1P39428 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.6□□□□□ -1.19
Traf1P39428 Gm19087-201ENSMUST00000191430 946 ntBASIC7.6□□□□□ -1.19
Traf1P39428 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.6□□□□□ -1.19
Traf1P39428 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC7.6□□□□□ -1.19
Traf1P39428 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Traf1P39428 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Traf1P39428 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.6□□□□□ -1.19
Traf1P39428 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
Traf1P39428 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Traf1P39428 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 116.2 ms