Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.73□□□□□ -1.49
P20040 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.73□□□□□ -1.49
P20040 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P20040 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.73□□□□□ -1.49
P20040 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P20040 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P20040 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
P20040 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
P20040 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
P20040 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
P20040 Gm22710-201ENSMUST00000116892 125 ntBASIC5.73□□□□□ -1.49
P20040 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.73□□□□□ -1.49
P20040 Gm12573-201ENSMUST00000118158 286 ntBASIC5.73□□□□□ -1.49
P20040 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.73□□□□□ -1.49
P20040 Gm14741-201ENSMUST00000120777 1009 ntBASIC5.73□□□□□ -1.49
P20040 Gm14531-201ENSMUST00000120845 285 ntBASIC5.73□□□□□ -1.49
P20040 Gm5843-201ENSMUST00000121631 476 ntBASIC5.73□□□□□ -1.49
P20040 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
P20040 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.73□□□□□ -1.49
P20040 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.73□□□□□ -1.49
P20040 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.73□□□□□ -1.49
P20040 Gm22523-201ENSMUST00000158696 100 ntBASIC5.73□□□□□ -1.49
P20040 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P20040 Gm6726-201ENSMUST00000172786 681 ntBASIC5.73□□□□□ -1.49
P20040 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC5.73□□□□□ -1.49
P20040 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.73□□□□□ -1.49
P20040 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
P20040 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Gm26738-201ENSMUST00000181312 601 ntBASIC5.73□□□□□ -1.49
P20040 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC5.73□□□□□ -1.49
P20040 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.73□□□□□ -1.49
P20040 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
P20040 Gm38030-201ENSMUST00000192376 475 ntBASIC5.73□□□□□ -1.49
P20040 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC5.73□□□□□ -1.49
P20040 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.73□□□□□ -1.49
P20040 Gm43063-201ENSMUST00000198198 1081 ntBASIC5.73□□□□□ -1.49
P20040 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC5.73□□□□□ -1.49
P20040 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC5.73□□□□□ -1.49
P20040 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.73□□□□□ -1.49
P20040 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.73□□□□□ -1.49
P20040 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.73□□□□□ -1.49
P20040 AC091237.1-201ENSMUST00000224911 637 ntBASIC5.73□□□□□ -1.49
P20040 CT009711.2-201ENSMUST00000225352 934 ntBASIC5.73□□□□□ -1.49
P20040 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P20040 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
P20040 Mir7b-201ENSMUST00000083557 111 ntBASIC5.73□□□□□ -1.49
P20040 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
P20040 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P20040 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P20040 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
P20040 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.73□□□□□ -1.49
P20040 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC5.73□□□□□ -1.49
P20040 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
P20040 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P20040 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P20040 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P20040 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P20040 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.72□□□□□ -1.49
P20040 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
P20040 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.72□□□□□ -1.49
P20040 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
P20040 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
P20040 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.72□□□□□ -1.49
P20040 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 AC159196.3-201ENSMUST00000224307 1841 ntBASIC5.72□□□□□ -1.49
P20040 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
P20040 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
P20040 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Gm23748-201ENSMUST00000104227 131 ntBASIC5.72□□□□□ -1.49
P20040 Gm12135-201ENSMUST00000119170 466 ntBASIC5.72□□□□□ -1.49
P20040 Gm14847-201ENSMUST00000121978 519 ntBASIC5.72□□□□□ -1.49
P20040 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.72□□□□□ -1.49
P20040 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
P20040 Gm23810-201ENSMUST00000175150 74 ntBASIC5.72□□□□□ -1.49
P20040 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.72□□□□□ -1.49
P20040 Gm10136-201ENSMUST00000183196 435 ntBASIC5.72□□□□□ -1.49
P20040 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms