Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdx1P18111 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Cdx1P18111 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdx1P18111 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm12321-201ENSMUST00000121485 804 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC5.33□□□□□ -1.56
Cdx1P18111 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm16260-201ENSMUST00000155141 304 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm38373-201ENSMUST00000192042 288 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm35108-201ENSMUST00000194321 699 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm33191-201ENSMUST00000195604 699 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC5.33□□□□□ -1.56
Cdx1P18111 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm44225-201ENSMUST00000203582 186 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm8479-201ENSMUST00000203825 718 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm18655-201ENSMUST00000214802 1090 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm9985-201ENSMUST00000044101 510 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdx1P18111 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 n-R5s60-201ENSMUST00000083299 119 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdx1P18111 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm37382-201ENSMUST00000193032 1596 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cdx1P18111 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm10259-201ENSMUST00000091289 1590 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm18537-202ENSMUST00000206215 1503 ntBASIC5.33□□□□□ -1.56
Cdx1P18111 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Cdx1P18111 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Cdx1P18111 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdx1P18111 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.32□□□□□ -1.56
Cdx1P18111 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms