Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm26025-201ENSMUST00000158655 271 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm24682-201ENSMUST00000158764 137 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm4956-202ENSMUST00000178869 672 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Mir8105-201ENSMUST00000184718 89 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm29354-201ENSMUST00000187613 696 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm5066-201ENSMUST00000188479 822 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm37383-201ENSMUST00000191750 745 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm35108-201ENSMUST00000194321 699 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm33191-201ENSMUST00000195604 699 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm6366-201ENSMUST00000198766 826 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm7285-201ENSMUST00000198801 580 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm42883-201ENSMUST00000202594 222 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm18690-201ENSMUST00000204488 985 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.46□□□□□ -1.38
Lire1P11260 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC6.46□□□□□ -1.38
Lire1P11260 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.46□□□□□ -1.38
Lire1P11260 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.46□□□□□ -1.38
Lire1P11260 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.46□□□□□ -1.38
Lire1P11260 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Lire1P11260 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Lire1P11260 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm23623-201ENSMUST00000082461 107 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm26226-201ENSMUST00000082509 116 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Lire1P11260 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
Lire1P11260 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Lire1P11260 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.46□□□□□ -1.38
Lire1P11260 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.45□□□□□ -1.38
Lire1P11260 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Lire1P11260 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lire1P11260 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Lire1P11260 Gm15421-202ENSMUST00000118224 399 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Gm15484-201ENSMUST00000118871 828 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Gm6987-201ENSMUST00000119319 428 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Gm8312-201ENSMUST00000119380 618 ntBASIC6.45□□□□□ -1.38
Lire1P11260 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Lire1P11260 Gm22882-201ENSMUST00000157749 124 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Gm22262-201ENSMUST00000158713 86 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Gm16113-201ENSMUST00000159629 372 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Lire1P11260 Gm17786-201ENSMUST00000182000 427 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Gm37017-201ENSMUST00000195266 747 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Gm4525-201ENSMUST00000198831 254 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Gm6581-201ENSMUST00000214545 260 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Gm2089-201ENSMUST00000218294 479 ntBASIC6.45□□□□□ -1.38
Lire1P11260 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.45□□□□□ -1.38
Lire1P11260 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Lire1P11260 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Lire1P11260 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.45□□□□□ -1.38
Lire1P11260 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
Lire1P11260 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Lire1P11260 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.44□□□□□ -1.38
Lire1P11260 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms