Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm15237-201ENSMUST00000122104 469 ntBASIC7.53□□□□□ -1.2
Col1a1P11087 Gm23050-201ENSMUST00000158775 165 ntBASIC7.53□□□□□ -1.2
Col1a1P11087 Gm22932-201ENSMUST00000175510 72 ntBASIC7.53□□□□□ -1.2
Col1a1P11087 Gm26057-201ENSMUST00000178099 165 ntBASIC7.53□□□□□ -1.2
Col1a1P11087 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC7.53□□□□□ -1.2
Col1a1P11087 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC7.53□□□□□ -1.2
Col1a1P11087 Ighv5-19-201ENSMUST00000193466 297 ntBASIC7.53□□□□□ -1.2
Col1a1P11087 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.53□□□□□ -1.2
Col1a1P11087 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.53□□□□□ -1.2
Col1a1P11087 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC7.53□□□□□ -1.2
Col1a1P11087 Gm8863-201ENSMUST00000216630 926 ntBASIC7.53□□□□□ -1.2
Col1a1P11087 AC158525.1-201ENSMUST00000223806 576 ntBASIC7.53□□□□□ -1.2
Col1a1P11087 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.53□□□□□ -1.2
Col1a1P11087 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col1a1P11087 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col1a1P11087 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Col1a1P11087 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC7.53□□□□□ -1.2
Col1a1P11087 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col1a1P11087 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Col1a1P11087 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Col1a1P11087 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.52□□□□□ -1.2
Col1a1P11087 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Col1a1P11087 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col1a1P11087 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.52□□□□□ -1.21
Col1a1P11087 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC7.52□□□□□ -1.21
Col1a1P11087 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 Gm7713-201ENSMUST00000181201 1007 ntBASIC7.52□□□□□ -1.21
Col1a1P11087 Gm28883-201ENSMUST00000189256 369 ntBASIC7.52□□□□□ -1.21
Col1a1P11087 Gm35013-201ENSMUST00000197218 832 ntBASIC7.52□□□□□ -1.21
Col1a1P11087 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.52□□□□□ -1.21
Col1a1P11087 Gm44833-201ENSMUST00000208368 331 ntBASIC7.52□□□□□ -1.21
Col1a1P11087 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC7.52□□□□□ -1.21
Col1a1P11087 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 Gm10095-201ENSMUST00000222765 483 ntBASIC7.52□□□□□ -1.21
Col1a1P11087 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col1a1P11087 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Col1a1P11087 Gm16335-201ENSMUST00000077495 309 ntBASIC7.52□□□□□ -1.21
Col1a1P11087 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC7.52□□□□□ -1.21
Col1a1P11087 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col1a1P11087 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
Col1a1P11087 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Col1a1P11087 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Col1a1P11087 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col1a1P11087 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.52□□□□□ -1.21
Col1a1P11087 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col1a1P11087 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col1a1P11087 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Col1a1P11087 AC122769.3-201ENSMUST00000227739 3245 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 Mir708-201ENSMUST00000102189 109 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Gm11105-201ENSMUST00000112781 478 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Gm8855-201ENSMUST00000118888 878 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Gm22636-201ENSMUST00000158142 275 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Gm21772-201ENSMUST00000169213 478 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Gm17126-201ENSMUST00000172276 523 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 Gm24957-201ENSMUST00000179604 132 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Trav3n-2-201ENSMUST00000197693 334 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Trav3d-2-201ENSMUST00000199874 334 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 AC123832.2-201ENSMUST00000215151 129 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Col1a1P11087 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Col1a1P11087 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.51□□□□□ -1.21
Col1a1P11087 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Col1a1P11087 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Col1a1P11087 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms