Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
UbbP0CG49 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.58□□□□□ -1.52
UbbP0CG49 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UbbP0CG49 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UbbP0CG49 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.58□□□□□ -1.52
UbbP0CG49 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
UbbP0CG49 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UbbP0CG49 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm45657-201ENSMUST00000211318 1349 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
UbbP0CG49 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm12937-201ENSMUST00000118333 448 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm13338-201ENSMUST00000120235 361 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm13740-201ENSMUST00000120590 310 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm22276-201ENSMUST00000122469 129 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm22035-201ENSMUST00000157284 228 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm24130-201ENSMUST00000158536 151 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm16113-201ENSMUST00000159629 372 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm7651-201ENSMUST00000173398 901 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm22119-201ENSMUST00000175594 99 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UbbP0CG49 Mir6348-201ENSMUST00000183804 120 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm28580-201ENSMUST00000186767 88 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm34144-201ENSMUST00000197039 259 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm43089-201ENSMUST00000199162 275 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm43377-201ENSMUST00000201640 455 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm9293-201ENSMUST00000223096 306 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.57□□□□□ -1.52
UbbP0CG49 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UbbP0CG49 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UbbP0CG49 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.57□□□□□ -1.52
UbbP0CG49 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
UbbP0CG49 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
UbbP0CG49 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
UbbP0CG49 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UbbP0CG49 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
UbbP0CG49 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
UbbP0CG49 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
UbbP0CG49 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
UbbP0CG49 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
UbbP0CG49 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
UbbP0CG49 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Gm11889-201ENSMUST00000118402 1079 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Gm13679-201ENSMUST00000118678 484 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
UbbP0CG49 Gm4887-201ENSMUST00000122230 1053 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Gm16357-201ENSMUST00000144091 474 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Gm24359-201ENSMUST00000158418 221 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Gm9529-201ENSMUST00000177598 579 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UbbP0CG49 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Gm27026-201ENSMUST00000183003 892 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UbbP0CG49 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.56□□□□□ -1.52
UbbP0CG49 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UbbP0CG49 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
UbbP0CG49 Gm9517-201ENSMUST00000195021 874 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.56□□□□□ -1.52
UbbP0CG49 Gm2225-201ENSMUST00000209570 377 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Gm18907-201ENSMUST00000209719 932 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UbbP0CG49 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.56□□□□□ -1.52
UbbP0CG49 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.56□□□□□ -1.52
UbbP0CG49 Gm7943-201ENSMUST00000212078 1034 ntBASIC5.56□□□□□ -1.52
UbbP0CG49 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
UbbP0CG49 AC102582.1-201ENSMUST00000215376 378 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms