Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Hoxa4P06798 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Hoxa4P06798 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Hoxa4P06798 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm12713-201ENSMUST00000118404 764 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm7058-201ENSMUST00000119209 902 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm2986-201ENSMUST00000121603 382 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Mir1953-201ENSMUST00000157866 89 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm27853-201ENSMUST00000184176 250 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm7554-201ENSMUST00000202282 574 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxa4P06798 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm9788-201ENSMUST00000057038 906 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.42□□□□□ -1.38
Hoxa4P06798 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxa4P06798 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Hoxa4P06798 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxa4P06798 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxa4P06798 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxa4P06798 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxa4P06798 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Hoxa4P06798 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxa4P06798 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm22284-201ENSMUST00000104132 132 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm24989-201ENSMUST00000104461 88 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm16511-201ENSMUST00000120019 564 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm15181-201ENSMUST00000120142 177 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm7494-201ENSMUST00000121248 441 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm8722-201ENSMUST00000121466 769 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm15164-201ENSMUST00000122203 271 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm22235-201ENSMUST00000157085 110 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm29464-201ENSMUST00000187692 513 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.41□□□□□ -1.38
Hoxa4P06798 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.41□□□□□ -1.38
Hoxa4P06798 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxa4P06798 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.41□□□□□ -1.38
Hoxa4P06798 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.41□□□□□ -1.38
Hoxa4P06798 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms