Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.6□□□□□ -1.35
Col4a6B1AVK5 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm23250-201ENSMUST00000157444 267 ntBASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm38181-201ENSMUST00000181357 720 ntBASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.6□□□□□ -1.35
Col4a6B1AVK5 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm14802-201ENSMUST00000121944 1885 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm25013-201ENSMUST00000158402 128 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm22932-201ENSMUST00000175510 72 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm28665-201ENSMUST00000189269 670 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm37235-201ENSMUST00000195171 59 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm43724-201ENSMUST00000197516 226 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm44382-201ENSMUST00000198683 122 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm45874-201ENSMUST00000212423 346 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col4a6B1AVK5 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Col4a6B1AVK5 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col4a6B1AVK5 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms