Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm22267-201ENSMUST00000104008 131 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm5793-201ENSMUST00000119393 630 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm8089-201ENSMUST00000122463 968 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm23757-201ENSMUST00000158353 100 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm6264-201ENSMUST00000160802 624 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm23632-201ENSMUST00000175289 125 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm20637-201ENSMUST00000175715 462 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm26509-201ENSMUST00000180947 948 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm44361-201ENSMUST00000197960 94 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm30646-201ENSMUST00000207662 180 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm45514-201ENSMUST00000211531 689 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Olfr687-201ENSMUST00000098154 938 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cldn3Q9Z0G9 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm13604-201ENSMUST00000119332 482 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm13207-201ENSMUST00000119862 773 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm22094-201ENSMUST00000158976 117 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm7804-202ENSMUST00000194187 854 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm19088-201ENSMUST00000198800 566 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm7769-201ENSMUST00000212900 933 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cldn3Q9Z0G9 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cldn3Q9Z0G9 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms