Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm5601-201ENSMUST00000118909 972 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm14863-201ENSMUST00000119648 307 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm14613-201ENSMUST00000122239 752 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm22990-201ENSMUST00000175427 89 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm27186-201ENSMUST00000184223 307 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm28846-201ENSMUST00000189161 368 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm43689-201ENSMUST00000195951 427 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm20128-201ENSMUST00000196189 417 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm4870-201ENSMUST00000198525 1251 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm46203-201ENSMUST00000218130 478 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm24621-201ENSMUST00000082679 140 ntBASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim3Q9R1R2 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.15□□□□□ -1.43
Trim3Q9R1R2 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
Trim3Q9R1R2 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm22231-201ENSMUST00000101027 73 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm13469-201ENSMUST00000118231 350 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm12654-201ENSMUST00000120387 587 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm5843-201ENSMUST00000121631 476 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm23756-201ENSMUST00000157582 114 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm26211-201ENSMUST00000158578 129 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm24682-201ENSMUST00000158764 137 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm37493-201ENSMUST00000193167 433 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm17895-201ENSMUST00000194028 874 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm44213-201ENSMUST00000204977 703 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm18914-201ENSMUST00000214625 616 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim3Q9R1R2 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms