Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm27156-201ENSMUST00000184589 754 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm29383-201ENSMUST00000188284 480 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm37270-201ENSMUST00000194277 330 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm43546-201ENSMUST00000196721 943 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm42713-201ENSMUST00000202709 945 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm45136-201ENSMUST00000205793 943 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm24411-201ENSMUST00000083428 131 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Lima1Q9ERG0 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Snord88a-201ENSMUST00000116723 90 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm13732-201ENSMUST00000117753 535 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm13983-201ENSMUST00000118018 865 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm15149-201ENSMUST00000119370 360 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm15311-201ENSMUST00000119682 282 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm15305-201ENSMUST00000120354 288 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm13740-201ENSMUST00000120590 310 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm14612-201ENSMUST00000121522 881 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm8089-201ENSMUST00000122463 968 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm25395-201ENSMUST00000157343 272 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm25556-201ENSMUST00000158077 144 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm19815-201ENSMUST00000175818 335 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm27152-201ENSMUST00000183828 99 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm27866-201ENSMUST00000184459 171 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm43390-201ENSMUST00000196614 421 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm42799-201ENSMUST00000201331 328 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm4042-201ENSMUST00000216946 637 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm24621-201ENSMUST00000082679 140 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lima1Q9ERG0 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lima1Q9ERG0 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms