Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm13878-201ENSMUST00000117986 577 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm15828-201ENSMUST00000119911 522 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm12587-201ENSMUST00000120180 427 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm15194-201ENSMUST00000120453 434 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm11383-201ENSMUST00000121346 807 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm13131-201ENSMUST00000122228 321 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm26323-201ENSMUST00000157743 175 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm26487-201ENSMUST00000158022 94 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm24724-201ENSMUST00000158230 107 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm22948-201ENSMUST00000158561 243 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm23186-201ENSMUST00000180078 107 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm37585-201ENSMUST00000195440 280 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm38079-201ENSMUST00000195603 154 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm42625-201ENSMUST00000198611 922 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm43578-201ENSMUST00000201250 459 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm31520-201ENSMUST00000203048 733 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm4270-201ENSMUST00000209666 406 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm3912-203ENSMUST00000211024 367 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm34424-201ENSMUST00000213400 782 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm17950-201ENSMUST00000214617 646 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 AC153957.1-201ENSMUST00000215235 229 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 AC156832.3-201ENSMUST00000215591 435 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm18040-201ENSMUST00000217922 827 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 AC166358.6-201ENSMUST00000221834 1206 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 CT025603.4-201ENSMUST00000225777 413 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm25614-201ENSMUST00000104013 133 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm13607-201ENSMUST00000117875 539 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm15361-201ENSMUST00000119320 444 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm11387-201ENSMUST00000120266 772 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm23079-201ENSMUST00000157847 117 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm7707-201ENSMUST00000165950 1156 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm19560-201ENSMUST00000177510 514 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm27373-201ENSMUST00000184017 184 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm36928-201ENSMUST00000192466 694 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm37325-201ENSMUST00000194971 694 ntBASIC8.12□□□□□ -1.11
Trim11Q99PQ2 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim11Q99PQ2 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms