Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Morf4l2-214ENSMUST00000166930 1926 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37222-201ENSMUST00000192806 2961 ntBASIC8.09□□□□□ -1.11
Pcdhb3Q91XZ7 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Pcdhb3Q91XZ7 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Pcdhb3Q91XZ7 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Pcdhb3Q91XZ7 Gm3203-201ENSMUST00000197670 2389 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm22471-201ENSMUST00000104116 130 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm15715-201ENSMUST00000118032 283 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm11461-201ENSMUST00000119909 387 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm7071-201ENSMUST00000120458 462 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm14678-201ENSMUST00000121396 482 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm15877-201ENSMUST00000121897 964 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm7076-201ENSMUST00000152421 456 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm16184-201ENSMUST00000162324 573 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm17142-201ENSMUST00000164933 645 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Nip7-202ENSMUST00000170962 606 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm18522-201ENSMUST00000173947 650 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm27957-201ENSMUST00000184054 127 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm37203-201ENSMUST00000191618 385 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm6057-201ENSMUST00000195927 314 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm17987-201ENSMUST00000206902 603 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm18781-201ENSMUST00000211252 924 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm35177-201ENSMUST00000216525 623 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 9230112J17Rik-202ENSMUST00000217430 764 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 AC132384.5-201ENSMUST00000218562 226 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 AC165157.2-201ENSMUST00000222265 367 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 AC105950.1-201ENSMUST00000222637 408 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 AC124686.1-201ENSMUST00000225546 522 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 AC140406.2-201ENSMUST00000227539 481 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm23975-201ENSMUST00000082685 106 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm26072-201ENSMUST00000083135 107 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm42540-201ENSMUST00000200319 2008 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Pramel-201ENSMUST00000118979 1383 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 AC147250.1-201ENSMUST00000224781 1364 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.08□□□□□ -1.12
Pcdhb3Q91XZ7 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Gm13878-201ENSMUST00000117986 577 ntBASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Gm7058-201ENSMUST00000119209 902 ntBASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Gm12104-201ENSMUST00000120359 979 ntBASIC8.07□□□□□ -1.12
Pcdhb3Q91XZ7 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms