Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Mir425-201ENSMUST00000083645 85 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Vps53Q8CCB4 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm37023-201ENSMUST00000192895 2426 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Snord88a-201ENSMUST00000116723 90 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm14550-201ENSMUST00000117918 407 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm11920-201ENSMUST00000118491 563 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm11553-201ENSMUST00000120682 240 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm14776-201ENSMUST00000121029 887 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Mir1907-201ENSMUST00000122509 90 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm22588-201ENSMUST00000157510 140 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm25717-201ENSMUST00000158631 353 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm4152-201ENSMUST00000172675 259 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm25574-201ENSMUST00000175245 249 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm43459-201ENSMUST00000202093 331 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm2926-201ENSMUST00000205625 239 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 AC152169.2-201ENSMUST00000224558 613 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm22351-201ENSMUST00000083925 107 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.7□□□□□ -1.18
Vps53Q8CCB4 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm23979-201ENSMUST00000104071 128 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm4911-201ENSMUST00000119388 945 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm21301-201ENSMUST00000189476 699 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm9504-201ENSMUST00000196322 468 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm36448-201ENSMUST00000199916 438 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm44538-201ENSMUST00000205615 348 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Vps53Q8CCB4 AC156559.2-201ENSMUST00000224403 384 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.69□□□□□ -1.18
Vps53Q8CCB4 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms