Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm13482-201ENSMUST00000119842 254 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm24139-201ENSMUST00000122780 288 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm24011-201ENSMUST00000157732 268 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm24369-201ENSMUST00000175387 96 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm3121-201ENSMUST00000187086 406 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm4605-201ENSMUST00000203148 625 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm45506-201ENSMUST00000211620 280 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 AC156504.1-201ENSMUST00000214608 157 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm18226-201ENSMUST00000215261 521 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm19219-201ENSMUST00000215863 724 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 AC154426.1-201ENSMUST00000225614 1132 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 AC131068.1-201ENSMUST00000226891 482 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm7984-201ENSMUST00000060640 538 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm24765-201ENSMUST00000083691 103 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm18957-201ENSMUST00000197623 1813 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm37289-201ENSMUST00000195409 1402 ntBASIC8.35□□□□□ -1.07
Trim47Q8C0E3 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim47Q8C0E3 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 AC121094.1-201ENSMUST00000224766 1345 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm13224-201ENSMUST00000119586 94 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm12331-201ENSMUST00000119927 622 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm14712-201ENSMUST00000120195 772 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm12006-201ENSMUST00000120786 403 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm15362-201ENSMUST00000121459 388 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm13508-201ENSMUST00000121639 775 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm24824-201ENSMUST00000175097 78 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm26607-201ENSMUST00000180661 867 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm28958-201ENSMUST00000185864 703 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm28404-201ENSMUST00000190242 453 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm5034-201ENSMUST00000199115 634 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm2505-201ENSMUST00000200413 825 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm43812-202ENSMUST00000202701 581 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm7495-201ENSMUST00000215099 426 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm29809-201ENSMUST00000218423 493 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 AC154250.1-201ENSMUST00000224775 489 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 AC150560.3-201ENSMUST00000227442 455 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Gm25810-201ENSMUST00000082752 108 ntBASIC8.34□□□□□ -1.07
Trim47Q8C0E3 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms