Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm28527-201ENSMUST00000185210 297 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm18839-201ENSMUST00000204292 670 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm4083-201ENSMUST00000207158 451 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm3266-201ENSMUST00000217832 591 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 AC167222.2-201ENSMUST00000220014 295 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm25133-201ENSMUST00000082647 130 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Usp47Q8BY87 Gm43279-201ENSMUST00000202376 2512 ntBASIC9.05□□□□□ -0.96
Usp47Q8BY87 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm37745-201ENSMUST00000193304 8163 ntBASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm37216-201ENSMUST00000193817 3478 ntBASIC9.04□□□□□ -0.96
Usp47Q8BY87 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm37945-201ENSMUST00000192536 4367 ntBASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm15616-201ENSMUST00000118662 375 ntBASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm12307-201ENSMUST00000120581 590 ntBASIC9.04□□□□□ -0.96
Usp47Q8BY87 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm5947-201ENSMUST00000179156 714 ntBASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm5645-201ENSMUST00000179597 714 ntBASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm23238-201ENSMUST00000083007 164 ntBASIC9.04□□□□□ -0.96
Usp47Q8BY87 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 AC159006.2-201ENSMUST00000228734 4144 ntBASIC9.04□□□□□ -0.96
Usp47Q8BY87 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Usp47Q8BY87 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC9.04□□□□□ -0.96
Usp47Q8BY87 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Usp47Q8BY87 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp47Q8BY87 AC152922.2-201ENSMUST00000213353 3879 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm11902-201ENSMUST00000118849 270 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm11976-201ENSMUST00000119236 295 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm12833-201ENSMUST00000136112 477 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm16269-201ENSMUST00000160532 409 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm27005-201ENSMUST00000182783 921 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm37511-201ENSMUST00000192901 294 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm44091-201ENSMUST00000205212 649 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm44770-201ENSMUST00000205395 1264 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 AC154634.2-201ENSMUST00000225983 1184 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 CT009556.1-201ENSMUST00000227282 449 ntBASIC9.03□□□□□ -0.96
Usp47Q8BY87 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Usp47Q8BY87 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC9.03□□□□□ -0.96
Usp47Q8BY87 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Usp47Q8BY87 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms