Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm44661-201ENSMUST00000208830 3503 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm13207-201ENSMUST00000119862 773 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm6446-201ENSMUST00000120604 818 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm25342-201ENSMUST00000157459 122 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm29664-201ENSMUST00000191125 463 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm43098-201ENSMUST00000199989 1297 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Gm21089-201ENSMUST00000215843 325 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 AC154250.1-201ENSMUST00000224775 489 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 AC174797.4-201ENSMUST00000225510 347 ntBASIC8.99□□□□□ -0.97
Usp40Q8BWR4 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Usp40Q8BWR4 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm6181-201ENSMUST00000117187 264 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm13400-201ENSMUST00000117436 380 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm14905-201ENSMUST00000122351 639 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm23894-201ENSMUST00000158107 313 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm16147-201ENSMUST00000162143 373 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Mir7072-201ENSMUST00000184542 60 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm28926-201ENSMUST00000191063 680 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm43392-201ENSMUST00000196560 434 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm5831-201ENSMUST00000216016 1209 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 AC115793.1-201ENSMUST00000216605 215 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm9321-201ENSMUST00000221179 778 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 AC102139.1-201ENSMUST00000227000 251 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.98□□□□□ -0.97
Usp40Q8BWR4 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.97□□□□□ -0.97
Usp40Q8BWR4 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm37040-201ENSMUST00000191740 1824 ntBASIC8.97□□□□□ -0.97
Usp40Q8BWR4 Gm44231-201ENSMUST00000204106 4075 ntBASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms