Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Gm10247-201ENSMUST00000090395 333 ntBASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scaf4Q6PFF0 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm23701-201ENSMUST00000103893 110 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm12225-201ENSMUST00000117995 298 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm11407-201ENSMUST00000120362 1058 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm25505-201ENSMUST00000157220 246 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Mir1962-201ENSMUST00000157516 121 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm24962-201ENSMUST00000157917 109 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm23031-201ENSMUST00000157998 119 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm6077-201ENSMUST00000196008 499 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm45712-201ENSMUST00000212417 335 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 AL929417.1-201ENSMUST00000214901 124 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm45965-201ENSMUST00000221192 1284 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm18960-201ENSMUST00000222962 713 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 AL844586.1-201ENSMUST00000224297 1042 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.88□□□□□ -1.31
Scaf4Q6PFF0 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.87□□□□□ -1.31
Scaf4Q6PFF0 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms