Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm19206-201ENSMUST00000186401 827 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.26□□□□□ -1.73
PrkdcP97313 AC122371.2-201ENSMUST00000220583 366 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
PrkdcP97313 AC125117.2-201ENSMUST00000228344 1140 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm37790-201ENSMUST00000193136 3346 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm16128-201ENSMUST00000117855 626 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.26□□□□□ -1.73
PrkdcP97313 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm8826-201ENSMUST00000193161 948 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm6543-201ENSMUST00000197353 808 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm18215-201ENSMUST00000204429 798 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 AC131747.2-201ENSMUST00000226121 1895 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm45528-201ENSMUST00000209854 3145 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm16057-201ENSMUST00000120811 759 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Mir6539-201ENSMUST00000183732 110 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm28640-201ENSMUST00000190918 550 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm43181-201ENSMUST00000197001 2072 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Gm44048-201ENSMUST00000204531 361 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Gm17992-201ENSMUST00000207346 1072 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC4.26□□□□□ -1.73
PrkdcP97313 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PrkdcP97313 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
PrkdcP97313 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PrkdcP97313 AC158115.1-201ENSMUST00000222830 3182 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm7337-202ENSMUST00000181439 2655 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PrkdcP97313 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PrkdcP97313 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
PrkdcP97313 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm24685-201ENSMUST00000157764 285 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gm6520-201ENSMUST00000200636 410 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gm5306-201ENSMUST00000203325 757 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC4.25□□□□□ -1.73
PrkdcP97313 AC124408.2-201ENSMUST00000228168 645 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PrkdcP97313 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm45493-201ENSMUST00000209494 3948 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Gm7048-201ENSMUST00000199395 1891 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Gm8276-201ENSMUST00000192231 1812 ntBASIC4.25□□□□□ -1.73
PrkdcP97313 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PrkdcP97313 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms