Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.17□□□□□ -1.26
Usp4P35123 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Usp4P35123 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp4P35123 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.16□□□□□ -1.26
Usp4P35123 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 Gm2288-201ENSMUST00000118560 638 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Gm12740-201ENSMUST00000118794 308 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp4P35123 Gm14212-201ENSMUST00000122023 826 ntBASIC7.16□□□□□ -1.26
Usp4P35123 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Gm16026-205ENSMUST00000162923 641 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.16□□□□□ -1.26
Usp4P35123 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Usp4P35123 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Gm43396-201ENSMUST00000197506 706 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.16□□□□□ -1.26
Usp4P35123 Gm43550-201ENSMUST00000200597 303 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Gm4602-201ENSMUST00000203198 308 ntBASIC7.16□□□□□ -1.26
Usp4P35123 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Usp4P35123 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp4P35123 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp4P35123 AC121542.1-201ENSMUST00000227245 721 ntBASIC7.16□□□□□ -1.26
Usp4P35123 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Usp4P35123 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp4P35123 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Usp4P35123 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.16□□□□□ -1.26
Usp4P35123 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.16□□□□□ -1.26
Usp4P35123 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.16□□□□□ -1.26
Usp4P35123 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Usp4P35123 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp4P35123 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.16□□□□□ -1.26
Usp4P35123 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp4P35123 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Usp4P35123 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Usp4P35123 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm12635-201ENSMUST00000117285 752 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm12383-201ENSMUST00000120628 760 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm11263-201ENSMUST00000121853 749 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm26069-201ENSMUST00000157497 277 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm22642-201ENSMUST00000175352 252 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Mir8094-201ENSMUST00000183361 117 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Mir8120-201ENSMUST00000185035 139 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm29513-201ENSMUST00000185741 202 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm29197-201ENSMUST00000185922 702 ntBASIC7.15□□□□□ -1.26
Usp4P35123 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.15□□□□□ -1.26
Usp4P35123 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Usp4P35123 Gm21728-201ENSMUST00000188442 695 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms