Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm28507-201ENSMUST00000189737 703 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm43089-201ENSMUST00000199162 275 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm44374-201ENSMUST00000199821 140 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm43725-201ENSMUST00000200122 369 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm9367-201ENSMUST00000205703 546 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.53□□□□□ -1.36
Hoxc11P31313 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm5080-201ENSMUST00000220341 743 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.53□□□□□ -1.36
Hoxc11P31313 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm22005-201ENSMUST00000082795 141 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.53□□□□□ -1.36
Hoxc11P31313 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Hoxc11P31313 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Hoxc11P31313 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Hoxc11P31313 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Hoxc11P31313 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
Hoxc11P31313 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Hoxc11P31313 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
Hoxc11P31313 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Hoxc11P31313 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm13006-201ENSMUST00000118683 214 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm15596-201ENSMUST00000121139 784 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm7494-201ENSMUST00000121248 441 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm11609-201ENSMUST00000121926 793 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm23441-201ENSMUST00000157268 127 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm22588-201ENSMUST00000157510 140 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm21392-201ENSMUST00000182950 972 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Mir6921-201ENSMUST00000183719 80 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm29663-201ENSMUST00000186962 853 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm5244-202ENSMUST00000189517 743 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm36935-201ENSMUST00000192526 292 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm37191-201ENSMUST00000193346 388 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm37319-201ENSMUST00000193500 636 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm43037-201ENSMUST00000196808 250 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm4290-201ENSMUST00000206897 814 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.52□□□□□ -1.37
Hoxc11P31313 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm5928-201ENSMUST00000221839 466 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm24621-201ENSMUST00000082679 140 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Mir412-201ENSMUST00000083636 80 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.52□□□□□ -1.37
Hoxc11P31313 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Hoxc11P31313 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.52□□□□□ -1.37
Hoxc11P31313 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Hoxc11P31313 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms