Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm11799-201ENSMUST00000116110 460 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm15502-201ENSMUST00000121449 208 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm12929-201ENSMUST00000122406 370 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm18833-201ENSMUST00000173218 862 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm24155-201ENSMUST00000175259 110 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Mir6989-201ENSMUST00000184812 65 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm37103-201ENSMUST00000191830 115 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm8454-201ENSMUST00000196980 811 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm29778-201ENSMUST00000201667 466 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.44□□□□□ -1.38
Hoxa4P06798 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Hoxa4P06798 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Hoxa4P06798 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.44□□□□□ -1.38
Hoxa4P06798 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.43□□□□□ -1.38
Hoxa4P06798 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Hoxa4P06798 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Hoxa4P06798 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.43□□□□□ -1.38
Hoxa4P06798 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm22103-201ENSMUST00000116733 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm26475-201ENSMUST00000116769 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm23620-201ENSMUST00000116812 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm25042-201ENSMUST00000116856 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm25540-201ENSMUST00000116880 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm12874-201ENSMUST00000117190 913 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm14513-201ENSMUST00000117403 123 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.43□□□□□ -1.38
Hoxa4P06798 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm11107-201ENSMUST00000165414 505 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm23550-201ENSMUST00000179003 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm25123-201ENSMUST00000179154 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm25353-201ENSMUST00000179366 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm22992-201ENSMUST00000179496 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm25892-201ENSMUST00000179867 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm24092-201ENSMUST00000180257 121 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm18600-201ENSMUST00000207205 505 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm45514-201ENSMUST00000211531 689 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm24695-201ENSMUST00000083877 83 ntBASIC6.43□□□□□ -1.38
Hoxa4P06798 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Hoxa4P06798 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Hoxa4P06798 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms