Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx1-1G3UXB3 Crx-201ENSMUST00000044434 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx1-1G3UXB3 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nkx1-1G3UXB3 Gm13140-201ENSMUST00000119840 3151 ntBASIC9.95□□□□□ -0.82
Nkx1-1G3UXB3 Wdr3-201ENSMUST00000052120 3432 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx1-1G3UXB3 Pan2-201ENSMUST00000005825 4445 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx1-1G3UXB3 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx1-1G3UXB3 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Olfr152-202ENSMUST00000105210 2084 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm14273-201ENSMUST00000136315 1786 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Hsd17b13-201ENSMUST00000048118 1708 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm9105-201ENSMUST00000120160 1398 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm22834-201ENSMUST00000102021 79 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm25761-201ENSMUST00000103983 128 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm25725-201ENSMUST00000104528 130 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm14292-201ENSMUST00000118761 456 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm12421-201ENSMUST00000119071 307 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm14749-201ENSMUST00000121269 333 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm22396-201ENSMUST00000177110 53 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm9457-201ENSMUST00000180176 372 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm21430-201ENSMUST00000182998 998 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm27602-201ENSMUST00000183861 111 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm4208-201ENSMUST00000189802 871 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm28717-201ENSMUST00000189950 315 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm7871-201ENSMUST00000195346 618 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm26413-201ENSMUST00000196783 126 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm45227-201ENSMUST00000205585 169 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm44811-201ENSMUST00000209120 228 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm18924-201ENSMUST00000211929 316 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 AC134900.1-201ENSMUST00000216575 266 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 CT571268.1-201ENSMUST00000222320 407 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm9293-201ENSMUST00000223096 306 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm9280-201ENSMUST00000223155 517 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 AC154788.1-201ENSMUST00000225003 340 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Uspl1-206ENSMUST00000122160 3827 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm38380-201ENSMUST00000195718 2248 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 Gm37759-201ENSMUST00000194155 3246 ntBASIC9.94□□□□□ -0.82
Nkx1-1G3UXB3 A030012G06Rik-201ENSMUST00000192385 1880 ntBASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Drp2-202ENSMUST00000113224 4147 ntTSL 5 BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Gm43161-201ENSMUST00000197020 1688 ntBASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Rhbdf2-201ENSMUST00000103028 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Armc9-202ENSMUST00000113309 3555 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Cdc25b-201ENSMUST00000028804 3089 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Rai14-202ENSMUST00000169385 4759 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Snrpd3-201ENSMUST00000020397 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Gm22019-201ENSMUST00000104359 96 ntBASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Gm25502-201ENSMUST00000104428 131 ntBASIC9.93□□□□□ -0.82
Nkx1-1G3UXB3 Gm13573-201ENSMUST00000116410 631 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms