Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
H2afb2S4R1M3 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
H2afb2S4R1M3 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
H2afb2S4R1M3 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
H2afb2S4R1M3 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.42□□□□□ -1.38
H2afb2S4R1M3 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
H2afb2S4R1M3 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
H2afb2S4R1M3 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.42□□□□□ -1.38
H2afb2S4R1M3 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm7746-201ENSMUST00000120966 503 ntBASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm5871-201ENSMUST00000176461 718 ntBASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm29650-201ENSMUST00000188485 742 ntBASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm2996-201ENSMUST00000211398 537 ntBASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm8607-201ENSMUST00000221864 431 ntBASIC6.41□□□□□ -1.38
H2afb2S4R1M3 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.41□□□□□ -1.38
H2afb2S4R1M3 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm24989-201ENSMUST00000104461 88 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm23884-201ENSMUST00000122687 294 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm26486-201ENSMUST00000158021 110 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm29778-201ENSMUST00000201667 466 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm7769-201ENSMUST00000212900 933 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gm9267-201ENSMUST00000222831 404 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
H2afb2S4R1M3 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.4□□□□□ -1.38
H2afb2S4R1M3 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
H2afb2S4R1M3 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
H2afb2S4R1M3 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
H2afb2S4R1M3 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
H2afb2S4R1M3 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
H2afb2S4R1M3 Robo2-210ENSMUST00000226478 8059 ntBASIC6.4□□□□□ -1.39
H2afb2S4R1M3 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H2afb2S4R1M3 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
H2afb2S4R1M3 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
H2afb2S4R1M3 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
H2afb2S4R1M3 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms