Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sec61a2Q9JLR1 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sec61a2Q9JLR1 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sec61a2Q9JLR1 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sec61a2Q9JLR1 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Sec61a2Q9JLR1 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sec61a2Q9JLR1 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Sec61a2Q9JLR1 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Sec61a2Q9JLR1 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm22671-201ENSMUST00000104420 134 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Mir290a-201ENSMUST00000104627 83 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm17184-201ENSMUST00000111864 462 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm14854-201ENSMUST00000117758 841 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm15739-201ENSMUST00000118049 872 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm12287-201ENSMUST00000119770 707 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm12587-201ENSMUST00000120180 427 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm25505-201ENSMUST00000157220 246 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm24532-201ENSMUST00000157951 286 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm16026-205ENSMUST00000162923 641 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm23633-201ENSMUST00000175293 119 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm27972-201ENSMUST00000184720 137 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm5147-201ENSMUST00000185999 794 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm8524-201ENSMUST00000186232 379 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm38166-201ENSMUST00000191660 471 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm6680-201ENSMUST00000192789 950 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm37349-201ENSMUST00000194205 624 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm43036-201ENSMUST00000200594 373 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm44943-201ENSMUST00000207254 300 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm44982-201ENSMUST00000208795 471 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm18960-201ENSMUST00000222962 713 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Tcf24-201ENSMUST00000097824 2639 ntBASIC6.29□□□□□ -1.4
Sec61a2Q9JLR1 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a2Q9JLR1 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.28□□□□□ -1.4
Sec61a2Q9JLR1 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Sec61a2Q9JLR1 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sec61a2Q9JLR1 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sec61a2Q9JLR1 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.28□□□□□ -1.4
Sec61a2Q9JLR1 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a2Q9JLR1 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a2Q9JLR1 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a2Q9JLR1 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sec61a2Q9JLR1 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms