Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm11920-201ENSMUST00000118491 563 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm13604-201ENSMUST00000119332 482 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm5793-201ENSMUST00000119393 630 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm13207-201ENSMUST00000119862 773 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm22094-201ENSMUST00000158976 117 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm44279-201ENSMUST00000205154 472 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm7769-201ENSMUST00000212900 933 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Rpa3Q9CQ71 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm24048-201ENSMUST00000102411 106 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm22267-201ENSMUST00000104008 131 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm23768-201ENSMUST00000104440 131 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm6067-201ENSMUST00000121648 491 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm26509-201ENSMUST00000180947 948 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm44361-201ENSMUST00000197960 94 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm45196-201ENSMUST00000206751 825 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Gm30646-201ENSMUST00000207662 180 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Rpa3Q9CQ71 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Rpa3Q9CQ71 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Rpa3Q9CQ71 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Rpa3Q9CQ71 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rpa3Q9CQ71 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rpa3Q9CQ71 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rpa3Q9CQ71 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rpa3Q9CQ71 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms