Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.11□□□□□ -1.43
Use1Q9CQ56 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Use1Q9CQ56 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm24888-201ENSMUST00000104387 130 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm13744-201ENSMUST00000118953 850 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm14300-201ENSMUST00000120800 946 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm22025-201ENSMUST00000122734 302 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm26486-201ENSMUST00000158021 110 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm22094-201ENSMUST00000158976 117 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm9064-201ENSMUST00000163579 566 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm5456-201ENSMUST00000170706 844 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Mir5100-201ENSMUST00000174993 64 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm17045-201ENSMUST00000178600 844 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Mir7029-201ENSMUST00000184777 61 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm5244-202ENSMUST00000189517 743 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm43157-201ENSMUST00000198223 412 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Use1Q9CQ56 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.1□□□□□ -1.43
Use1Q9CQ56 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm24173-201ENSMUST00000104130 128 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Snord88a-201ENSMUST00000116723 90 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm13604-201ENSMUST00000119332 482 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Mir1981-201ENSMUST00000157934 82 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Mir6348-201ENSMUST00000183804 120 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm27596-201ENSMUST00000185061 83 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm37103-201ENSMUST00000191830 115 ntBASIC6.09□□□□□ -1.43
Use1Q9CQ56 Gm42782-201ENSMUST00000197286 522 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms