Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm42581-201ENSMUST00000201774 966 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm8921-201ENSMUST00000204306 649 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 AC157650.2-201ENSMUST00000224666 328 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 AV026068-229ENSMUST00000225516 595 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 AC115735.3-201ENSMUST00000227757 513 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 AC157572.4-201ENSMUST00000228203 549 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm9788-201ENSMUST00000057038 906 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm20900-201ENSMUST00000078729 472 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gm16020-201ENSMUST00000084281 210 ntBASIC8.15□□□□□ -1.1
Trim11Q99PQ2 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim11Q99PQ2 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim11Q99PQ2 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Trim11Q99PQ2 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim11Q99PQ2 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim11Q99PQ2 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.11
Trim11Q99PQ2 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Trim11Q99PQ2 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim11Q99PQ2 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim11Q99PQ2 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.15□□□□□ -1.11
Trim11Q99PQ2 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm8812-201ENSMUST00000118496 412 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm12727-201ENSMUST00000119885 359 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm13525-201ENSMUST00000120607 478 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm22339-201ENSMUST00000157718 62 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm22555-201ENSMUST00000157801 62 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm26738-201ENSMUST00000181312 601 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm27163-201ENSMUST00000184767 409 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm6610-201ENSMUST00000186324 358 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm18349-201ENSMUST00000187440 904 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm42646-201ENSMUST00000202233 914 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm18484-201ENSMUST00000204389 991 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.14□□□□□ -1.11
Trim11Q99PQ2 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 AC192333.5-201ENSMUST00000224620 2350 ntBASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim11Q99PQ2 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms