Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm37395-201ENSMUST00000194721 697 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm37729-201ENSMUST00000194761 1172 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm43590-201ENSMUST00000195987 387 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm44356-201ENSMUST00000196731 111 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm42461-201ENSMUST00000198627 1150 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm45506-201ENSMUST00000211620 280 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 AC124420.1-201ENSMUST00000219779 791 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm23927-201ENSMUST00000082466 215 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm37238-201ENSMUST00000195552 2390 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm44735-201ENSMUST00000206197 1752 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm13742-201ENSMUST00000118805 457 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm11259-201ENSMUST00000120554 715 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm12642-201ENSMUST00000121098 876 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm25116-201ENSMUST00000157191 122 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm23222-201ENSMUST00000158117 76 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm24465-201ENSMUST00000178398 107 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Mir6972-201ENSMUST00000184774 64 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm27458-201ENSMUST00000185108 121 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm29592-201ENSMUST00000189434 370 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm37270-201ENSMUST00000194277 330 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm8077-201ENSMUST00000209221 1024 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm4270-201ENSMUST00000209666 406 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 AC159246.1-201ENSMUST00000214478 249 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC7.79□□□□□ -1.16
Ccdc9Q8VC31 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm24373-201ENSMUST00000104393 132 ntBASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm14998-201ENSMUST00000120502 495 ntBASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm24883-201ENSMUST00000158391 281 ntBASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Mir1231-201ENSMUST00000175639 81 ntBASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm34583-203ENSMUST00000202586 454 ntBASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC7.78□□□□□ -1.16
Ccdc9Q8VC31 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 133.5 ms