Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.86□□□□□ -1.31
CopaQ8CIE6 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CopaQ8CIE6 Gm19116-201ENSMUST00000218592 642 ntBASIC6.86□□□□□ -1.31
CopaQ8CIE6 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.86□□□□□ -1.31
CopaQ8CIE6 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.86□□□□□ -1.31
CopaQ8CIE6 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.86□□□□□ -1.31
CopaQ8CIE6 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CopaQ8CIE6 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CopaQ8CIE6 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.86□□□□□ -1.31
CopaQ8CIE6 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.86□□□□□ -1.31
CopaQ8CIE6 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CopaQ8CIE6 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CopaQ8CIE6 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CopaQ8CIE6 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CopaQ8CIE6 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.86□□□□□ -1.31
CopaQ8CIE6 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CopaQ8CIE6 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm14756-201ENSMUST00000116395 240 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm13141-201ENSMUST00000117417 456 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm14070-201ENSMUST00000120773 428 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm13460-201ENSMUST00000121274 353 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm6451-201ENSMUST00000121488 717 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm12778-201ENSMUST00000122341 333 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm15242-201ENSMUST00000122459 283 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm7613-201ENSMUST00000139070 487 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm8582-201ENSMUST00000164061 789 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm27158-201ENSMUST00000183813 238 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm28665-201ENSMUST00000189269 670 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm29141-201ENSMUST00000190357 882 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm7663-201ENSMUST00000201151 1240 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm45845-201ENSMUST00000207326 582 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.85□□□□□ -1.31
CopaQ8CIE6 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm11972-201ENSMUST00000118514 389 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm13121-201ENSMUST00000120637 632 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm6061-201ENSMUST00000175860 492 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms